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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs4035022 chr2:201744352 G/A 4.29E-5 490 16.23 15.68 4.33 KM Plot
THCA rs404572 chr2:38399088 C/T 0.000187 478 16.07 15.83 16.37 KM Plot
THCA rs4054484 chr4:22602921 AAC/A 2.43E-5 482 15.9 16.17 34.1 KM Plot
THCA rs4055608 chr6:79494258 T/C 5.05E-6 488 18.8 16.17 15.77 KM Plot
THCA rs4076750 chr1:22423543 A/G 1.86E-7 480 15.33 18.2 6.57 KM Plot
THCA rs4084488 chr1:91830280 C/G 7.73E-6 489 15.68 17 17.77 KM Plot
THCA rs408583 chr3:155580839 C/T 9.52E-5 484 16.57 14.63 9.75 KM Plot
THCA rs410042 chr3:155589421 C/T 9.33E-5 485 16.57 14.65 9.75 KM Plot
THCA rs41266801 chr6:26197493 C/A 2.25E-8 489 15.67 16.8 4.75 KM Plot
THCA rs41266807 chr6:26199822 A/G 2.3E-8 488 15.63 16.8 4.75 KM Plot
THCA rs41268101 chr1:41467164 G/A 0.000231 470 14.93 17.67 15.9 KM Plot
THCA rs41271775 chr6:24424927 T/A 5.55E-15 488 16.37 14.85 11.07 KM Plot
THCA rs41271777 chr6:24425125 C/T 6.22E-15 487 16.33 14.85 11.07 KM Plot
THCA rs41271781 chr6:24425957 G/A 6.22E-15 487 16.33 14.85 11.07 KM Plot
THCA rs41273221 chr1:156890672 T/C 6.73E-7 480 16.63 14.87 11.3 KM Plot